process Mass Spectrometry Analysis — Process Description¶ 1. Principle¶ Electrospray ionization mass spectrometry (ESI-MS) produces gas-phase ions from peptide molecules in solution. Peptides with molecular weights of 500 – 5000 Da typically produce multiply charged ions, enabling accurate mass determination. 2. ESI-MS Interpretation¶ Charge State m/z Value Neutral Mass [M+H]⁺ (M+1)/1 M = (m/z − 1) × 1 [M+2H]²⁺ (M+2)/2 M = (m/z × 2) − 2 [M+3H]³⁺ (M+3)/3 M = (m/z × 3) − 3 3. Acceptance Criteria¶ Parameter Criteria Mass Accuracy Within ±0.5 Da of theoretical monoisotopic mass Charge State Series ≥3 identifiable charge states for MW up to 5000 Da Signal to Noise ≥10:1 for the base peak 4. Common Adducts¶ Adduct Mass Shift (Da) Na⁺ +22.0 K⁺ +38.0 TFA adduct +113.0 Acetonitrile adduct +41.0